Allow the slection of many individual features in the conflict resolution window. Allow each selected feature to be reconciled the same way.
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Oracle databases can be set to automatically update statistics.
The SQL Server script in KB24518 is still applicable for geodatabases in SQL Server 2008, 2008R2 and 2012.
Also, if you are using ArcGIS 10.2 or 10.1, there are some new geoprocessing tools in the ArcToolbox that can accomplish this:Data Management Tools > Geodatabase Administration > Analyze Datasets: Updates the database statistics of base tables, delta tables, and archive tables, along with the statistics on those tables’ indexes. This tool is used in enterprise geodatabases to help get optimal performance from the RDBMS query optimizer. Stale statistics can lead to poor geodatabase performance.Data Management Tools > Geodatabase Administration > Rebuild Indexes: Updates indexes of datasets and system tables stored in an enterprise geodatabase. This tool is used in enterprise geodatabases to rebuild existing attribute or spatial indexes. Out-of-date indexes can lead to poor geodatabase performance.
No matter which one you choose, these resources can be run as automated tasks using SQL, or the ArcToolBox tools can be exported to Python and automated as well.Ken G. - Geodata Support Analyst