Hi! Bit of a late reply, but there is a limitation regarding overwriting features in ArcGIS Online from ArcGIS Pro. As Geetesh mentioned above, "Joined View" layers will cause this error, as well as any view layers with Areas of Interest defined within them.
As a workaround, the view layers need to be deleted. Then, the hosted feature layer can be overwritten from ArcGIS Pro and the views regenerated. A big thing to note: With the introduction of the Recycle Bin, when the option has been turned on, deleted items will be sent there unless specifically marked for permanent deletion. While in the Recycle Bin, items still technically exist within the organization and will continue to consume storage space, as well as remain "tied" to anything they were originally a part of. So in order for the workaround to actually work, the view layers will need to be either permanently deleted during the initial deletion process or permanently deleted from the Recycle Bin.
Here's some more information on the error specifically, as well as other general limitations to overwriting:
