I ran the Tree Detection deep learning package against our 2022 leaf-off aerial photography to produce an output of ~116,000 tree boxes within my study area. I calculated area, mean greenness, mean infrared, and mean LiDAR intensity for each tree crown box using zonal statistics as table. After making some selections of evergreen tree boxes and inspecting histograms, scatterplots and box plots, I was able to come up with a query to select evergreens that works fairly well:
Area <=1000 AND Intensity >=40 AND MeanIR >=84
Note: green from the 3-band imagery was not useful due to a large number of nearly white deciduous trees having high green values, so IR from 2021 imagery was used.
This was an iterative trial and error process and I was wondering what else I could do to help me arrive at the magic numbers. I can probably train a new model using a set of carefully selected evergreen tree boxes, but for now I'm looking for suggestions on this process.
The green boxes in the attached video show all trees, while the yellow boxes shown later are the evergreens resulting from the query.
Interesting work. So you used the leaf off imagery just to identify the tree boxes? I assume you used CIR imagery for the calculations. Did you try to do the calculations with a mid spring image or was it mid season? It seems like there would be more differentiation between tree types in and early budding timeframe.
Correct. I used leaf-off imagery collected between end of February - early April 2022 for the initial input. I was a little surprised at first that it found so many leaf-off deciduous trees given the very different appearance of the evergreens. I believe the learning package could only use a 3-band image but will have to double check. As for the 2021 imagery, an afterthought when green didn't work out, I think it's generally captured in the same timeframe of the year.
Thanks for the info. I'm interested in trying this with my multispectral drone imagery to see if I can easily identify tree species. Again, great work, Thanks for sharing!
Thanks! I find it very interesting too. Love to hear what you find.
What if you also used NAIP imagery? I think that is typically leaf on. There may also be a companion classified dataset for that.
USGS NASS is 30 meter pixels, probably too large to help but....The NASS is classified for evergreen, deciduous, and mixed forest.
Thanks. The leaf-off imagery showed better separation between the evergreens and deciduous trees, especially with IR. I still use NAIP for general land cover though. Though interesting, I was looking for something higher res than NASS.