Hey Jan Creupelandt I had the same issue as you did! I spent 2 days of work trying to figure it out.
Here is what worked for me:
1. Uninstalling python and ArcGIS Pro (including any extensions I had installed separately).
2. Removing any leftover folders from Programming files for Python and ArcGIS. Make sure you have no leftovers of the previous clones(refer to this solution: "Failed to load system tools" error from ArcGIS Pro Geoprocessing - Geographic Information Systems S... )
3. Clear cache
Clear all cache files in the AppData folder:
C:\Users\\AppData\Local\ESRI\Local Caches
4. Once that done, I installed Python 3.6.2 again.
5. Installed ArcGIS Pro latest version.
6. Cloned a new env and used python command prompt to install untools with the line recommended by Christian Becker: conda install -c esri untools --insecure
Once these steps completed, I finally got rid of the annoying GP error and all my toolsets work like a charm and my heart is beating again after lost hope...