When creating a blank Pro project from the Create a New Project dialog, add two more options underneath the option to Create a new folder for this project - one option - Create a New File Geodatabase with the ability to toggle on / off depending on whether you will need a new file geodatabase. The second option would be Create a New ToolBox with the same toggle on / off.
IMHO, it is just not necessary to have a new geodatabase and a new toolbox for every single project I create.
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