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Lars,
Did you manage to get past the 1000 record problem ?
Regards
Here is the latest article on how to expand the maxRecordCount in ArcGIS Online:
https://support.esri.com/en/technical-article/000012383
This is a good way to expand the results in tools like the WebApp Builder Query widget. But there is a trade-off between increasing results and performance, so use with caution.
I'd like to emphasize that, while you can increase the max record count of the service, it's not a recommended practice. Most of Esri's current client apps don't use this setting and already fetch data in spatial tiles and paginate as needed. There are some specific cases where it may help, for example, with ArcMap, as mentioned in the support article.
Thanks,
Mike