I believe the existing Feature Compare tool works by comparing two feature classes using individual records Object ID's as the linking basis for feature to feature comparison. I have the need and believe others would too, for this to be expanded to allow the user to pick the field used for the linking and then comparison. OID does changes regularly and I believe individual users whom have implemented UID/GUID/ Esris GlobalID would get better results especially in scenarios where large scale data aggregation efforts come together.
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