I'm having the same issue now. Did you ever find a fix for this?
I had the same issue, and it turned out for me that I had the shape field turned off in some of my features when I published them.
I noticed that for layers that have a large number of records, the Attribute table returns the messages that there are no features. I dont know what is the cut off. I tried for 10K and it works but for 60K nope.