on a simple tool of the toolbox you can use the "batch" command to apply the tool to multiple objects, and than use "fill" to fill all the fields that you need to be equal.. but this isn't useful for the output names...
I think it would be useful to have a "search and replace" tool in order to avoid tons of little modifications in paths and names!!!
i.e.
from "..\raster_UTM\123.tif" to "..\raster_WGS\123.tif"
from "..\raster_UTM\124.tif" to "..\raster_WGS\124.tif" etc.
M2