Map Service Won't Publish from ArcMap or Python

[LloydBronn]

I'm trying to publish a map service from ArcMap (10.3). It sits at 0% on "analyzing service" forever before I have to close ArcMap in the task manager. If I try to publish from Python, it creates a 51KB service definition file and then Python crashes. I'm getting no errors and nothing shows up in the ArcGIS server logs. This service has five layers, two of which are time enabled NetCDF rasters, and one that is a graphics layer. I'm not sure how to proceed. 

[MichaelVolz]

Was the table with the missing data source associated with the NetCDF files?  I ask because I had a feature class with an associated where I deleted the feature class and it left the standalone table behind.  I then changed the name of the table's file gdb so it was a missing data source.  When I analyzed the mxd prior to publishing it showed an error with this table and it would not let me proceed to the publishing step until this was corrected.