Is there any way using REST or the JavaScript API to determine if a service is secured and if so what groups have access to them? I'm using windows authentication to secure the map service.
You can query for a folder or service's Permissions using the ArcGIS Server REST API.
The resulting JSON will define any principals (i.e. in your case a Windows groups) and the type of permissions each principal has on the folder or service.
Thank you Erin. That's just what I was looking for.
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