Better support should be added to the SDK that specifies what versions of ArcGIS Pro are supported by a specific configuration.
For example, a property in the ConfigurationManager could return a list of versions that are supported. Only the versions at or above the versions specified would be supported and a message displayed if you are running an older version.
For example, if the SupportedVersions return only "3.2.2" and the user is running 3.2.1, then a message would be displayed that ArcGIS Pro 3.2.2 or higher is required.
This may be necessary if a newer SDK contains functionality that the configuration uses that older versions do not provide. This includes something that was patched in an update like 3.2.2, not just a minor release of 3.2.