Good point GISDev01, the token is becomming invalid but I am not sure why. The publishing itself is working, so my web app can access the services no problem, after we overwrite the service, then the call to the service returns:
{"error":{"code":498,"message":"Invalid Token","details":[]}}
If I go in and regenerate the token and upfate my proxy.config, it all works again. I have been having some problems with this Amazon instance randomly failing status checks. When I generate the token I use Request IP while logged into the server. Should I be using the IP address of the load balancer?