topic Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script in Python Questions

Spatial Analyst's SegmentMeanShift tool fails in standalone script

EvanBlaisdell — Sat, 11 Dec 2021 21:19:22 GMT

In ArcMap 10.4, I can run the SegmentMeanShift tool (Segment Mean Shift—Help | ArcGIS for Desktop ) in the Python window, or from the ArcToolbox, just fine.

However, when trying to run a standalone script incorporating the tool, I receive the ever-useful "Unexpected Error."

I am using the standalone tool template as provided in the link above. My Spatial Analyst licenses are valid. I am not using the optional band indexes parameter.

# Import system modules
import arcpy
from arcpy.sa import *

# Set local variables
inRaster = r"Path:\blah\blah\master.img"
spectral_detail = "15"
spatial_detail = "15"
min_segment_size = "10"

# Check out the ArcGIS Spatial Analyst extension license
arcpy.CheckOutExtension("Spatial")

# Execute
seg_raster = SegmentMeanShift(inRaster, spectral_detail, spatial_detail, min_segment_size)

# Save the output
seg_raster.save(r"Path:\blah\blah\seg_test.img")

This is the error:

File "C:\Program Files (x86)\ArcGIS\Desktop10.4\ArcPy\arcpy\sa\Functions.py", line 7783, in SegmentMeanShift
band_indexes)
File "C:\Program Files (x86)\ArcGIS\Desktop10.4\ArcPy\arcpy\sa\Utils.py", line 53, in swapper
result = wrapper(*args, **kwargs)
File "C:\Program Files (x86)\ArcGIS\Desktop10.4\ArcPy\arcpy\sa\Functions.py", line 7776, in Wrapper
band_indexes)
File "C:\Program Files (x86)\ArcGIS\Desktop10.4\ArcPy\arcpy\geoprocessing\_base.py", line 506, in <lambda>
return lambda *args: val(*gp_fixargs(args, True))
arcgisscripting.ExecuteError: ERROR 999998: Unexpected Error.
Failed to execute (SegmentMeanShift).

Again, it works fine within ArcMap. I should say I have gotten it to work in a standalone script before, with different spectral, spatial, and min_size parameters. If it's a problem with the inputs I don't know why it would work within ArcMap.

Any thoughts? Thanks.

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

DanPatterson_Retired — Tue, 18 Oct 2016 20:23:06 GMT

If you do it within arcmap, what do the results look like in the Results window? Export it as a python snippet from there for comparison. The only obvious difference between your example and the help topic example is the 4th option isn't specified and you used raw formatting for the paths and they used foreward slashes. I am assuming that Path:\blah\blah doesn't contain spaces or other evil characters in it

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

EvanBlaisdell — Thu, 27 Oct 2016 16:42:33 GMT

The paths are fine, and the 4th parameter is optional, but just for giggles I tried specifying that parameter and experienced the same behavior.

This is how it looks in the Results window, after having run successfully within ArcMap:

It also works in the Python window within ArcMap:

arcpy.gp.SegmentMeanShift_sa("D:/REDACTED/master.img", "D:/REDACTED/segments.img", "20", "15", "10", "1 2 3")

But not in a standalone script:

Traceback (most recent call last):
File "C:\Program Files (x86)\JetBrains\PyCharm 2016.2.3\helpers\pydev\_pydevd_bundle\pydevd_exec.py", line 3, in Exec
exec exp in global_vars, local_vars
File "<input>", line 1, in <module>
File "C:\Program Files (x86)\ArcGIS\Desktop10.4\ArcPy\arcpy\geoprocessing\_base.py", line 506, in <lambda>
return lambda *args: val(*gp_fixargs(args, True))
ExecuteError: ERROR 999998: Unexpected Error.
Failed to execute (SegmentMeanShift).

I have tried two different syntaxes in the script:

segments = SegmentMeanShift(in_raster, 20.0, 15, 10, '1 2 3')

and

arcpy.gp.SegmentMeanShift_sa(in_raster, segments, 20.0, 15, 10, "1 2 3")

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

DanPatterson_Retired — Thu, 27 Oct 2016 17:06:11 GMT

so now you have narrowed down to the pycharm environment... hmmmm

you keep saying the 'script'

do you mean you did it the same way in the arcmap python window and compared it to doing it inside of pycharm s command line? line by line regardless of the IDE should work whether it is arcmaps' ide, pythonwin, pycharm, spyder whatever. If everything works on a line by line basis, then that is good. unfortunately back to you running your full script

so try your arcpy.gp.Segm.... in pycharm after import arcpy etc

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

EvanBlaisdell — Thu, 27 Oct 2016 18:03:25 GMT

Well, new wrinkle. I adjusted the parameters and it works for some combinations but not others. It seems that spectral_detail is the culprit, with the tool failing for anything 18.0 or higher. The supposed maximum is 20.0. Of course, still, when I run it in ArcMap it works fine. Whether this is a problem with my particular data or a bug in the tool is a mystery to me.

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

DanPatterson_Retired — Thu, 27 Oct 2016 18:25:16 GMT

That would require testing with a different set of data... but that is pretty well it, since I see nothing on the bug list

Esri Support Search-Results

If you remove the 'bug' filter... you get to see your post plus some help file topics and other posts

Esri Support Search-Results

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

EvanBlaisdell — Thu, 27 Oct 2016 19:59:05 GMT

Similar behavior with a different dataset, but the maximum functioning value of the spectral_detail parameter was a bit different.

Perhaps more importantly, I tried my script on a machine that was still on 10.3, and it works fine. Same script on 10.4, no dice.

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

DanPatterson_Retired — Thu, 27 Oct 2016 20:10:06 GMT

then time to pass it up the food chain to tech support.. it could be a bug. I don't imagine that there is a whole crowd using that tool in the world so it may have gone largely unnoticed, especially since you indicate it only fails in a standalone script and/or a non-arcmap python IDE. Worth a shot... anyone can file a bug in Support

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

YiZou1 — Thu, 27 Oct 2016 22:48:10 GMT

arcpy.gp.SegmentMeanShift_sa(in_raster,r"C:\test\seg_test.img", 20.0, 15, 10, "1 2 3")

Can you try this again?

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

DanPatterson_Retired — Wed, 17 Jan 2018 21:34:30 GMT

it takes 5... at least in the newer software versions, check your version help if arcmap 10.6 and Pro 2.1 isn't being used

SegmentMeanShift (in_raster, {spectral_detail}, {spatial_detail}, {min_segment_size}, {band_indexes})

http://pro.arcgis.com/en/pro-app/tool-reference/spatial-analyst/segment-mean-shift.htm

from the help

seg_raster = SegmentMeanShift("c:/test/moncton.tif", "15", "10", "20", "4 3 2")

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

NilsRatnaweera1 — Wed, 17 Jan 2018 21:59:59 GMT

Yes that's what the error says, it takes only 5 arguments. I had tried it since Yi Zou (ESRI employee?) had suggested it.

Were you able to resolve your issue? I have problems running SegmentMeanShift within a python IDE as well.

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

DanPatterson_Retired — Wed, 17 Jan 2018 23:09:43 GMT

I am just a humble observer and I didn't have the problem, I am pointing out the current requirements... if the software was an older version or from a different package, the parameters might differ. It is obvious in your case that Yi's solution doesn't apply

Re: Spatial Analyst's SegmentMeanShift tool fails in standalone script

NilsRatnaweera1 — Sat, 11 Dec 2021 21:19:24 GMT

I'm experiancing the same problem as described by Dan Patterso but I can't solve it by reducing spectral detail.

Your suggestion

arcpy.gp.SegmentMeanShift_sa(in_raster,r"C:\test\seg_test.img", 20.0, 15, 10, "1 2 3")

returns this error:

Traceback (most recent call last):
  File "<input>", line 1, in <module>
TypeError: SegmentMeanShift() takes at most 5 arguments (6 given)‍‍‍